Mastering Image Processing in Python with Scikit-Image — A Comprehensive Guide to Image Processing Techniques (91/100 Days of Python)

Martin Mirakyan
6 min readApr 2, 2023

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Day 91 of the “100 Days of Python” blog post series covering image processing techniques with scikit-image

Image processing is an essential part of computer vision and machine learning, playing a crucial role in various industries, from healthcare to entertainment. In this tutorial, we’ll explore image processing in Python using the powerful scikit-image library. We’ll cover some fundamental techniques and provide real-world examples to illustrate their potential applications.

Setting up the Environment

Before we start, ensure that you have Python and pip installed. To install scikit-image, run the following command in your terminal:

pip install scikit-image

Loading and Displaying Images

Reading and displaying images are the first steps in any image-processing task. Scikit-image makes this easy with its io.imread() and io.imshow() functions.

import numpy as np
import matplotlib.pyplot as plt

from skimage import data, io, color, filters, transform, restoration, exposure, feature


image = io.imread('example.jpg') # Read an image from a file
io.imshow(image) # Display the image
io.show()
An example jpg image that can be loaded by the scikit-image library

Converting Images to Grayscale

Grayscale conversion is a common preprocessing step, as it simplifies image data while preserving essential information. Scikit-image provides the color.rgb2gray() function to perform this conversion.

gray_image = color.rgb2gray(image)  # Convert the image to grayscale
io.imshow(gray_image) # Display the grayscale image
io.show()
The result of the RGB to Grayscale conversion

Grayscale conversion is beneficial in optical character recognition (OCR) systems, as it simplifies the text extraction process.

OCR systems are used to extract text from scanned documents and images, automating data entry and reducing manual labor. Grayscale conversion is often applied in OCR systems to simplify image data while retaining the essential information required for text extraction.

For example, a company that receives invoices from various suppliers may use an OCR system to extract relevant information and store it in a database. By converting the scanned invoice images to grayscale, the OCR system can more effectively recognize text and extract data, increasing the system’s accuracy and efficiency.

Image Filtering

Image filtering helps to improve image quality by reducing noise, enhancing edges, and emphasizing specific features. Scikit-image offers various filters, such as Gaussian, median, and Sobel filters:

gaussian_filtered = filters.gaussian(image, sigma=1, channel_axis=-1)
io.imshow(gaussian_filtered)
io.show()
Apply a Gaussian blur filter on the original image

Image filtering is extensively used in medical imaging applications, such as MRI and CT scans, to improve image clarity, remove outlier pixels, and assist in diagnostics.

In medical imaging, such as MRI and CT scans, image filtering plays a critical role in improving image clarity and assisting in diagnostics. Filters can help reduce noise, enhance edges, and emphasize specific features, making it easier for medical professionals to identify abnormalities and make accurate diagnoses.

For instance, in the field of radiology, image filtering techniques can be applied to enhance bone structures or soft tissue details in X-ray images. By improving the quality of these images, doctors can detect fractures, tumors, and other medical conditions with greater accuracy, leading to better patient outcomes.

Image Transformation

Image transformations, like resizing, rotating, and flipping, are often required for data augmentation and preprocessing. Scikit-image provides the transform module to perform these tasks.

resized_image = transform.resize(image, (100, 100))
io.imshow(resized_image)
io.show()
Resized the initial image to a small 100 by 100 image

Image transformations are useful in facial recognition systems, where images need to be aligned and standardized for accurate comparisons.

Facial recognition systems are used in various applications, such as security, law enforcement, and social media. Image transformations like resizing, rotating, and flipping are crucial for preprocessing and data augmentation in these systems. For accurate facial recognition, images need to be aligned and standardized to ensure proper comparisons between different face images.

For example, at an airport, facial recognition systems may be used to verify passengers’ identities by comparing their face images with the ones stored in a database. By applying image transformations, the system can align and standardize the images, leading to improved recognition accuracy and faster processing times.

Image Restoration

Image restoration techniques, such as denoising and deblurring, help recover lost or distorted image information. Scikit-image’s restoration module offers several restoration algorithms.

Apply denoising using the total variation (TV) algorithm

Image restoration finds applications in satellite imaging, where atmospheric distortions and sensor noise can adversely affect image quality.

Satellite imaging is used for various purposes, such as environmental monitoring, urban planning, and disaster management. Image restoration techniques, like denoising and deblurring, can help recover lost or distorted image information, leading to better decision-making in these applications.

For instance, in disaster management, satellite images are crucial for assessing the extent of damage and planning relief efforts. Atmospheric distortions and sensor noise can adversely affect image quality, making it difficult to identify affected areas. By applying image restoration techniques, clearer images can be obtained, allowing for more effective disaster response.

Image Histogram Equalization

Histogram equalization improves image contrast by redistributing pixel intensity values. Scikit-image provides the exposure module to perform histogram equalization and related operations.

gray_image = color.rgb2gray(image)
equalized_image = exposure.equalize_hist(gray_image)
io.imshow(equalized_image)
io.show()
Perform histogram equalization on the grayscale image

Histogram equalization is valuable in automotive and surveillance systems, as it enhances the visibility of details in low-light or high-contrast environments.

In automotive and surveillance systems, image contrast plays a vital role in detecting objects and recognizing patterns. Histogram equalization enhances image contrast by redistributing pixel intensity values, improving visibility in low-light or high-contrast environments.

For instance, in a surveillance system, cameras may capture images with poor contrast due to varying lighting conditions. By applying histogram equalization, the visibility of objects and people in these images can be improved, allowing for more accurate monitoring and detection of suspicious activities.

Similarly, in automotive applications like advanced driver assistance systems (ADAS), histogram equalization can enhance the visibility of road signs, pedestrians, and other vehicles, leading to safer driving experiences.

Feature Detection

Feature detection helps identify and extract meaningful information from images, such as corners, edges, and shapes. Scikit-image’s feature module offers various feature detection algorithms.

gray_image = color.rgb2gray(image)
corners = feature.corner_harris(gray_image)
io.imshow(corners)
io.show()
Detect corners using the Harris corner detection method

Feature detection is essential in computer vision applications like object recognition, robotics, and autonomous navigation systems.

In computer vision applications like object recognition and autonomous navigation systems, feature detection is essential for identifying and extracting meaningful information from images. By detecting corners, edges, and shapes, these systems can recognize objects and make decisions based on the extracted information.

For example, in an autonomous robot used for warehouse management, feature detection can help the robot recognize and locate different items on shelves. By identifying specific features, such as edges and corners, the robot can differentiate between objects, enabling it to accurately pick and place items for inventory management.

In autonomous navigation systems, feature detection can help vehicles identify road signs, traffic signals, and other important landmarks. By recognizing and understanding these features, the vehicle can make informed decisions about its route and driving behavior, leading to safer and more efficient transportation.

What’s next?

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Martin Mirakyan
Martin Mirakyan

Written by Martin Mirakyan

Software Engineer | Machine Learning | Founder of Profound Academy (https://profound.academy)

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